FastQCFastQC Report
Tue 14 Jan 2025
4DNFIB3SLPOK.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIB3SLPOK.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43618100
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGCTGTGCTTCGCTTT1448100.3319952038259346No Hit
CAGACGCGTAAGGCTGACTTACAT1371670.31447266157856485No Hit
CAGACGCGGTCACCATGTAACGAA1012230.2320665045015716No Hit
CAGACGCGCATGGCGGAGTCGCAA966650.22161671416224No Hit
CAGACGCGATAGCTCCTTAACCGC898740.20604748945965093No Hit
CAGACGCGGGTTACAACCTTTAGC867760.19894493341067127No Hit
CAGACGCGTCTCAAACTTCAATAC865220.19836260634919908No Hit
CAGACGCGTTTGAGCTGAGGAACT821240.1882796362060704No Hit
CAGACGCGGTCTAGCTGTCATCAG625600.1434266967153544No Hit
CAGACGCGTGCTAGCCTATCCTCC610350.13993044172029503No Hit
CAGACGCGGGGAGGACTCGATTAT597380.1369569055048248No Hit
CAGACGCGCCTTTCTGATTGCTAT541690.12418927005073581No Hit
CAGACGCGAAGCACGCTCCATCCC506420.11610317735068698No Hit
CAGACGCGCCTAAGGACCTCGACC484350.1110433512693125No Hit
CAGACGCGTGTGAGCACGCCACTT483450.11083701490894834No Hit
CAGACGCGCTAACGGACAAAGGTA475810.10908544847207924No Hit
CAGACGCGACAAAGAACTAATGCA473990.10866819049889839No Hit
CAGACGCGAGGACTTACGTAGCTA464980.10660253426903052No Hit
CAGACGCGTAGGTAGCTTAACGGA462960.10613942377132429No Hit
CAGACGCGTAAGGCTGATCCGTCA443030.10157021970237128No Hit
CAGACGCGGCTGCAAGAGGGAGCA442350.101414321118985No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)