FastQCFastQC Report
Tue 14 Jan 2025
4DNFIB3K8R38.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIB3K8R38.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32750717
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGCGATTAGGACTCGCTA4519961.380110243082617No Hit
CAGACGCGCTTGCGCACACCGTTC2804730.856387357870669No Hit
CAGACGCGGGTTGCAGATAACTTC1871950.5715752726879232No Hit
CAGACGCGGATTTAGGAACAGGAA1857020.5670165938657159No Hit
CAGACGCGGGGAGGACTTGTTGCG1581820.4829878991656885No Hit
CAGACGCGATTGGGATGTGCGGAA1469190.44859781237766483No Hit
CAGACGCGGACTCAAACCAGGTTG1099400.3356873072427697No Hit
CAGACGCGTGTAAGTACCGTAAAT1069500.3265577361252885No Hit
CAGACGCGAAACTAGCTCCTCACC952690.2908913414017776No Hit
CAGACGCGGACTTACCTTTATCCC905720.27654967065301195No Hit
CAGACGCGCATCATGTGTCACGGC734890.22438898055270057No Hit
CAGACGCGTGCTTCCTGGTCCTAG691370.21110072185595205No Hit
CAGACGCGGGACCATGAGTCCCTG671780.20511917342145516No Hit
CAGACGCGACGGCTCCTATTGGCT649100.19819413419254303No Hit
CAGACGCGAGTGAATCTTTATCCC627560.1916171789460365No Hit
CAGACGCGGATGAAGGATAACCTT602270.18389521059951147No Hit
CAGACGCGCGGTATTTGAATCGAG602160.18386162354857757No Hit
CAGACGCGCGCCTCTCTCAAACTT589410.17996857900851454No Hit
CAGACGCGAAATGGAACACCTTGC576550.1760419474175176No Hit
CAGACGCGCATCCAGCTCAAGAAC576010.17587706553111493No Hit
CAGACGCGCGAACTAGAAGGCTAC566800.1730649133574694No Hit
CAGACGCGGCTATGGGAGTCCCTG561480.17144052143957642No Hit
CAGACGCGACAGGCTGAGCTTTGT554190.16921461597314036No Hit
CAGACGCGACAACTAGATACTTCA502990.15358137044755388No Hit
GGGGGGGGGGGGGGGGGGGGGGGG492220.1502928928243006No Hit
CAGACGCGATATCAGGATTACTTG489100.1493402419250852No Hit
CAGACGCGCAATGAGCTCTAGCCA475230.14510522013914995No Hit
CAGACGCGTAATCCGTGCAGCAAG456180.13928855359105574No Hit
CAGACGCGCGGCAAGCTTAGTGCC448440.13692524655261745No Hit
CAGACGCGGAATCCGGACTCAATT427120.1304154654079787No Hit
CAGACGCGGGGTAGCTGCAAGGGT423480.12930403935889404No Hit
CAGACGCGACTTGTCGATTCATGT407870.12453773149455018No Hit
CAGACGCGTCGCAACCTAAGCACG399250.12190572804864087No Hit
CAGACGCGCTTGAATCTTGAGGAT393460.12013782782221226No Hit
CAGACGCGCCTATGGCTGGCTATT381200.1163943983272183No Hit
CAGACGCGCCCTTTACTAAGCTAA376970.11510282355039739No Hit
CAGACGCGTCAGTAAACCTGGTGA374000.1141959731751827No Hit
CAGACGCGTACGGGCGAGGCAATC366670.11195785423567979No Hit
CAGACGCGCAGTAAGCTGGCCAAA353570.10795794180628168No Hit
CAGACGCGCCGTTAGCTTGATGAG348070.10627858925958782No Hit
CAGACGCGTGGAGCGCTTCTCACT339730.10373208012514658No Hit
CAGACGCGCGCCTCTCTATCCTAG333840.10193364621605078No Hit
CAGACGCGATATCAGGACATTACT330870.1010267958408361No Hit
CAGACGCGCCACAAAGACCATTAT327600.10002834441761993No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)