FastQCFastQC Report
Tue 14 Jan 2025
4DNFIB387DF1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIB387DF1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42067432
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGCCTTACGGACTCAATT1557930.3703411227954205No Hit
CAGACGCGAGTAACCACGGTACGC1239930.29474820331319485No Hit
CAGACGCGGGTTATCCTTCAAGGA1180490.2806185079231839No Hit
CAGACGCGTCAATGAACGCTAACA1163940.2766843481199423No Hit
CAGACGCGGCGGATACTAGGCTGA870640.20696295414466942No Hit
CAGACGCGCGGGAACCTAACGGAC654370.15555263748925774No Hit
CAGACGCGAGGTTATGACACCTTG615870.14640066453307635No Hit
CAGACGCGTAGGCATGAGGTTGGT596760.14185795795664446No Hit
CAGACGCGCCTGCTCCTATGTGGG595210.14148950190256443No Hit
GGGGGGGGGGGGGGGGGGGGGGGG544050.12932807498209065No Hit
CAGACGCGAGCGTGCACCGCAACA507010.12052316385749431No Hit
CAGACGCGGTAGCAGCTCCCTCAC458430.10897503798187633No Hit
CAGACGCGGGCATGGTGACACAAG441970.10506227240112968No Hit
CAGACGCGCAGTCTATGTGCGGAA435570.10354090546815409No Hit
CAGACGCGAACGGGAACGGATTTG429540.10210749256099112No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)