FastQCFastQC Report
Tue 14 Jan 2025
4DNFIB2TYO48.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIB2TYO48.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26602156
Sequences flagged as poor quality0
Sequence length24
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGTGAACCGACAGAATC1419410.5335695347399662No Hit
CAGACGCGCGGTATTTGCATGTTG985040.3702857768370353No Hit
CAGACGCGGACCAGGTGACCTGGT741620.2787819152703262No Hit
CAGACGCGTGCCTCGACCTGATTC484180.1820078041794808No Hit
CAGACGCGCTGTATTGAATCCGTT471240.1771435367870183No Hit
CAGACGCGTACCGCACTTAGGCCT430290.16175004762771858No Hit
CAGACGCGGCGAGGTTGGCTTTAA422320.15875404985971814No Hit
GGGGGGGGGGGGGGGGGGGGGGGG391680.14723618642037886No Hit
CAGACGCGAGTTAACGAGCGAACT333300.12529059674712079No Hit
CAGACGCGTAGGCATGACCGTTGT297030.11165636349174105No Hit
CAGACGCGCTTACTGACAATTGGC288610.10849120650220981No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)