FastQCFastQC Report
Tue 14 Jan 2025
4DNFIA172XVO.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIA172XVO.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54811948
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTAACCGGACCGTGCTC2330410.4251646009734958No Hit
CAGACGCGTTAGGAGCTAGATTGA1800800.3285415070451428No Hit
CAGACGCGGCTCGACCTGGACCTC976520.17815823659469282No Hit
CAGACGCGGGTAACCGAAGGACAA915170.16696542148073262No Hit
CAGACGCGCGGATTAGAGTTACTC894780.16324542962786143No Hit
CAGACGCGACATTAGGATTGAGTG857090.15636919162223534No Hit
CAGACGCGTGGTCAAGATGACTTT791860.14446850164858216No Hit
CAGACGCGACAGGCTGACCATGCT791050.14432072364952256No Hit
CAGACGCGTTTGTACGAGCTTACT779660.14224270956398047No Hit
CAGACGCGCTTGAGCCTAAGAATC772880.14100575297925919No Hit
CAGACGCGCAGCGATACATAACGC751570.1371179145101721No Hit
CAGACGCGGTGGTGACTTGATTAC742980.13555073795224357No Hit
CAGACGCGACTTGTCGAGGCGGAA737590.13456737571158756No Hit
CAGACGCGACTCAATTGTCATCCC730300.13323737372005096No Hit
CAGACGCGGTTATTGTGTTGACCA719720.13130713763356852No Hit
CAGACGCGGACACCTTGGCCATCA699170.1275579550648337No Hit
CAGACGCGACAGTTAGATCCCTTT698180.12737733751042746No Hit
CAGACGCGTCCGTTAACAAAGCTC696440.1270598884754105No Hit
CAGACGCGAGTGAGCCTAACCCTA666000.12150635478235512No Hit
CAGACGCGGCTATACCTAAATACG661970.12077111362653996No Hit
CAGACGCGCCAAATAACGCGAACC652310.11900872415627338No Hit
CAGACGCGCGGTTAGACCTTTGAC643230.11735215103101243No Hit
CAGACGCGGCGCATTTGAATCGAG637130.11623925498871159No Hit
CAGACGCGGTCAAGCGACCAAATG636360.11609877466861787No Hit
CAGACGCGCAAGGCTACCGCACTC633080.11550036499341348No Hit
CAGACGCGGTTAGTTTGGCCACAT632740.11543833472220327No Hit
CAGACGCGGATAGCCGAAGTAAGG627710.11452065159224044No Hit
CAGACGCGACAATTGGAACCTGGA620250.11315963446509873No Hit
CAGACGCGGCCATAAACAAGCTCA612760.11179314407873261No Hit
CAGACGCGCTGGATCCTAAATGCA609020.11111081109542029No Hit
CAGACGCGAATTAGCGACGGTTGG602920.10999791505311943No Hit
CAGACGCGGTCGATTCTAAATCCC599110.10930281113161679No Hit
CAGACGCGCGGCACTTGAGCCTTG598020.10910394937979581No Hit
CAGACGCGACTAAGACTATCCGTA597380.1089871865163413No Hit
CAGACGCGGTGGCTAGAGGCCCTT590380.10771009269730752No Hit
CAGACGCGCCAACAAGACACCGTT590200.10767725314196094No Hit
CAGACGCGGCGCATCCTCAAGGTA581660.10611919868273975No Hit
CAGACGCGTTCGTAACTTGTCCAG579390.10570505540142452No Hit
CAGACGCGGGAGGCTTGTTGCGGC577350.10533287377416325No Hit
CAGACGCGCGCCTCTCTGGTAAAT575290.10495704330741903No Hit
CAGACGCGTGTGTTACTATCCTAG575140.10492967701129688No Hit
CAGACGCGAAGCCTAACAGCTATG562950.10270570934643665No Hit
CAGACGCGGCTTCTTTGATTTGGT561240.10239373357064413No Hit
CAGACGCGTCTAACCACCTGATTC557720.10175153782164428No Hit
CAGACGCGCCTTACGGATAGCCAA553360.1009560908143604No Hit
CAGACGCGTACGCCACTTGCAACC548560.10008036933845153No Hit
CAGACGCGCGGATTAGAAATGCAT548440.10005847630155382No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)