FastQCFastQC Report
Tue 14 Jan 2025
4DNFI9UGQ3UF.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI9UGQ3UF.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70439793
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGGGAACCTGTAATGGA2085870.29612097241682694No Hit
CAGACGCGCTAACAGGATTATTGC1917020.27215014672175425No Hit
CAGACGCGCCAATATCTTCAACCG1147050.16284119403928402No Hit
CAGACGCGCGGTTAGACTCAATAG1102740.15655071558770764No Hit
CAGACGCGGGAACAAGAGCTTGCC1014860.14407481293989607No Hit
CAGACGCGCTCTAGCGACGAAGGA980230.1391585577203499No Hit
CAGACGCGCGATCCGTGTTCAAGC937840.13314065247182086No Hit
CAGACGCGCGTAAATACCTTTACG924260.1312127649211008No Hit
CAGACGCGCAATGCGACCTCACAT906220.12865171253413538No Hit
CAGACGCGCATAGTGGATTACGGA829600.11777433815002836No Hit
CAGACGCGAAATGACCTCACAACC828290.11758836372503252No Hit
GGGGGGGGGGGGGGGGGGGGGGGG815670.11579676277583609No Hit
CAGACGCGTCTCTATTGCACCTAA787620.11181463863756669No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)