FastQCFastQC Report
Tue 14 Jan 2025
4DNFI9S623DS.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI9S623DS.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23686674
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGTGAACCGACAGAATC1585290.6692750531374729No Hit
CAGACGCGCGGTATTTGCATGTTG957730.4043328328831646No Hit
CAGACGCGGACCAGGTGACCTGGT804540.3396593375667686No Hit
CAGACGCGGCGAGGTTGGCTTTAA480720.20294955720672309No Hit
CAGACGCGTGCCTCGACCTGATTC476320.20109197264250775No Hit
CAGACGCGCTGTATTGAATCCGTT462980.195460113986455No Hit
CAGACGCGTACCGCACTTAGGCCT428730.18100050686727906No Hit
CAGACGCGAGTTAACGAGCGAACT317550.1340627223560387No Hit
CAGACGCGCTTACTGACAATTGGC313920.13253021509056104No Hit
CAGACGCGTAGGCATGACCGTTGT279910.11817193076579685No Hit
CAGACGCGGCCTGTTACCTTAGAA266760.11262028598865337No Hit
CAGACGCGAAATGTCGAAATAACC251360.1061187400138998No Hit
CAGACGCGTCGCTAATGCTGGAAG238720.1007824061748813No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)