FastQCFastQC Report
Tue 14 Jan 2025
4DNFI96P9GBI.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI96P9GBI.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42319199
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGCTGTGCTTCGCTTT1602440.3786555600922409No Hit
CAGACGCGTAAGGCTGACTTACAT1504400.3554887700024757No Hit
CAGACGCGGTCACCATGTAACGAA1107500.26170155063662714No Hit
CAGACGCGCATGGCGGAGTCGCAA982400.232140499634693No Hit
CAGACGCGATAGCTCCTTAACCGC976170.23066835456880933No Hit
CAGACGCGTCTCAAACTTCAATAC924990.2185745528879221No Hit
CAGACGCGGGTTACAACCTTTAGC922000.2178680177760453No Hit
CAGACGCGTTTGAGCTGAGGAACT889870.21027571906547665No Hit
CAGACGCGGTCTAGCTGTCATCAG632850.1495420553682975No Hit
CAGACGCGTGCTAGCCTATCCTCC613440.14495548462531155No Hit
CAGACGCGGGGAGGACTCGATTAT597070.1410872639626284No Hit
CAGACGCGCCTTTCTGATTGCTAT533850.12614841788475248No Hit
GGGGGGGGGGGGGGGGGGGGGGGG527390.12462192396410907No Hit
CAGACGCGAAGCACGCTCCATCCC495330.1170461662093368No Hit
CAGACGCGTGTGAGCACGCCACTT492340.11633963109746004No Hit
CAGACGCGAGGACTTACGTAGCTA476490.11259428610640763No Hit
CAGACGCGCTAACGGACAAAGGTA475480.11235562374420179No Hit
CAGACGCGCCTAAGGACCTCGACC470900.11127337263637717No Hit
CAGACGCGACAAAGAACTAATGCA468790.11077478096879857No Hit
CAGACGCGTAGGTAGCTTAACGGA461960.1091608562818025No Hit
CAGACGCGTAAGGCTGATCCGTCA438630.1036479920142156No Hit
CAGACGCGGAAACTCACACAAAGA438260.10356056124786295No Hit
CAGACGCGGCTGCAAGAGGGAGCA432980.10231290058207386No Hit
CAGACGCGCCTATGGCTAAGGTGC427550.1010297950110067No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)