FastQCFastQC Report
Tue 14 Jan 2025
4DNFI8YC2YST.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI8YC2YST.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27821207
Sequences flagged as poor quality0
Sequence length24
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGTGAACCGACAGAATC1435670.5160344049774692No Hit
CAGACGCGCGGTATTTGCATGTTG1031610.370799872198212No Hit
CAGACGCGGACCAGGTGACCTGGT705200.2534757029053412No Hit
CAGACGCGCTGTATTGAATCCGTT480650.17276389194760672No Hit
CAGACGCGTGCCTCGACCTGATTC447760.16094197494738455No Hit
CAGACGCGGCGAGGTTGGCTTTAA418000.15024509899947905No Hit
CAGACGCGTACCGCACTTAGGCCT401860.1444437691003126No Hit
GGGGGGGGGGGGGGGGGGGGGGGG350980.1261555618345387No Hit
CAGACGCGAGTTAACGAGCGAACT313180.11256880407812646No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)