FastQCFastQC Report
Tue 14 Jan 2025
4DNFI8MEDDPW.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI8MEDDPW.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18238170
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGACATAGTGATTCATCA526230.2885322376093654No Hit
CAGACGCGTCCCATAACCCAAAGC513320.28145367654759224No Hit
CAGACGCGCAACCTGCTCACATTA431880.23680007369160394No Hit
CAGACGCGGCAACGGTGGCTTCGA367050.20125374420788927No Hit
CAGACGCGGAGAGCAACCTAGTAA316320.1734384535290547No Hit
CAGACGCGAAGACAAACGCTAATG305470.16748939175366828No Hit
CAGACGCGAAGTGAGGATAGCCAA303410.16635989246728153No Hit
CAGACGCGAGTCTTGCTGACCGCT290320.1591826372931056No Hit
CAGACGCGGGCGAGAGAGTATGTA251500.13789760705158466No Hit
CAGACGCGTCCTAAGTGTCCCGGA235230.1289767558916273No Hit
CAGACGCGCAGGCCTTGCTAGAAA227230.12459035089595064No Hit
CAGACGCGTAAATCCCTGATCCTA207580.11381624362531986No Hit
CAGACGCGCGTAAAGCTCACTCAG182780.10021838813872226No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)