FastQCFastQC Report
Tue 14 Jan 2025
4DNFI7RWJ9BA.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI7RWJ9BA.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45523228
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGCCTTACGGACTCAATT1475790.3241839528602849No Hit
CAGACGCGAGTAACCACGGTACGC1177720.2587074888450353No Hit
CAGACGCGGGTTATCCTTCAAGGA1116980.24536484978613554No Hit
CAGACGCGTCAATGAACGCTAACA1111000.2440512346795794No Hit
CAGACGCGGCGGATACTAGGCTGA828340.1819598557466092No Hit
CAGACGCGCGGGAACCTAACGGAC632700.13898399296288919No Hit
CAGACGCGAGGTTATGACACCTTG597490.1312494799358253No Hit
CAGACGCGCCTGCTCCTATGTGGG571520.12554469994966086No Hit
CAGACGCGTAGGCATGAGGTTGGT567280.1246133072988585No Hit
GGGGGGGGGGGGGGGGGGGGGGGG499710.10977033526708606No Hit
CAGACGCGAGCGTGCACCGCAACA486150.10679163612914268No Hit
CAGACGCGGTAGCAGCTCCCTCAC485670.10668619545169337No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)