FastQCFastQC Report
Tue 14 Jan 2025
4DNFI7F3XP2T.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI7F3XP2T.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77973910
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGGTATAGTGAGAACCA2834120.36347029410221954No Hit
CAGACGCGCGGGAACCTCCTTAAA2416470.3099075062415108No Hit
CAGACGCGGAATGCATGTTCAAGC2237290.28692802502785864No Hit
CAGACGCGTTTGTGCACACTTAGG2167110.2779275785964818No Hit
CAGACGCGTAACCGTTGCACACTA2036880.261225838232301No Hit
CAGACGCGTCCCTTTGAATAGTCA1938420.24859853763906414No Hit
CAGACGCGAGAATCGTGGTGCTGT1727780.22158437354238103No Hit
CAGACGCGGGGAGGACTCTTGAAT1558960.1999335418731727No Hit
CAGACGCGAGAATCGTGCCGGAAA1405980.18031415892828767No Hit
CAGACGCGCGATATAACTTATCGC1398650.17937410090118605No Hit
CAGACGCGCTGAGCAACAAAGGTA1231210.15790025150720285No Hit
CAGACGCGCAGTAATACGCCACTT1122770.14399303561922186No Hit
CAGACGCGCAGGATCACCGCCCAT1080810.1386117484681735No Hit
CAGACGCGTACCTCCTGCGGATAG1047470.13433595929715467No Hit
CAGACGCGTACAACAACCTTTGAC1012950.12990883745601572No Hit
CAGACGCGAATGAGCTGGCCGGAA1002220.12853273614212754No Hit
CAGACGCGGCTCAGGACTCACTGT928430.11906931433860377No Hit
CAGACGCGAGCCAAATGCAGGCAA903950.11592980267374048No Hit
GGGGGGGGGGGGGGGGGGGGGGGG882490.1131776000459641No Hit
CAGACGCGCAGGATCACTAAGCAT881300.11302498489558878No Hit
CAGACGCGGGGCTATGAGACTCAG790260.10134928465175082No Hit
CAGACGCGCTTGAATCTTCCAGCA784130.10056312425527975No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)