FastQCFastQC Report
Fri 8 Aug 2025
4DNFI6WCA3TD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI6WCA3TD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61897469
Sequences flagged as poor quality0
Sequence length35-37
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN17039212.7528120737860866No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCC2680790.4331017153544679TruSeq Adapter, Index 6 (100% over 36bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)