FastQCFastQC Report
Tue 14 Jan 2025
4DNFI6VRP3XL.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI6VRP3XL.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23267207
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGGTATAGTGAGAACCA935640.40212819699416436No Hit
CAGACGCGCGGGAACCTCCTTAAA814030.3498615025000637No Hit
CAGACGCGGAATGCATGTTCAAGC776380.3336799298686774No Hit
CAGACGCGTTTGTGCACACTTAGG743110.31938083500954795No Hit
CAGACGCGTAACCGTTGCACACTA677890.2913499673596406No Hit
CAGACGCGTCCCTTTGAATAGTCA624590.2684421899027245No Hit
CAGACGCGAGAATCGTGGTGCTGT556710.23926808232719982No Hit
CAGACGCGGGGAGGACTCTTGAAT544700.23410631108409358No Hit
CAGACGCGAGAATCGTGCCGGAAA485650.20872724431428316No Hit
CAGACGCGCGATATAACTTATCGC471420.20261134050167687No Hit
CAGACGCGCTGAGCAACAAAGGTA422830.18172787133410556No Hit
CAGACGCGTACAACAACCTTTGAC355750.1528975953151575No Hit
CAGACGCGGCTCAGGACTCACTGT330380.14199383707722205No Hit
CAGACGCGTACCTCCTGCGGATAG328660.14125459923058234No Hit
CAGACGCGCAGTAATACGCCACTT323680.13911424779089301No Hit
CAGACGCGCAGGATCACCGCCCAT315660.13566733643621257No Hit
CAGACGCGAATGAGCTGGCCGGAA314040.13497107753414495No Hit
CAGACGCGAGCCAAATGCAGGCAA299070.1285371295317053No Hit
CAGACGCGCTTGAATCTTCCAGCA275180.11826945967343652No Hit
CAGACGCGCAGGATCACTAAGCAT275150.11825656599006491No Hit
CAGACGCGCTATAACCTAACAGGC257490.11066648437863642No Hit
CAGACGCGGCAGTTAACCGGTTGA252930.1087066445061498No Hit
CAGACGCGGGGCTATGAGACTCAG244340.10501475316740853No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)