FastQCFastQC Report
Tue 14 Jan 2025
4DNFI6TYPV61.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI6TYPV61.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences239495909
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGGAGGCTTGGCCATCA9510980.3971249462970994No Hit
CAGACGCGGACGAGGGAAGCTAAT8208690.34274865212833344No Hit
CAGACGCGTAGCCACCTCACTAAT6102940.25482439451606664No Hit
CAGACGCGAACAGCTACGCGTTTC4518880.1886829724511077No Hit
CAGACGCGCAGAGGGACCCAAACG4019810.16784462067784214No Hit
CAGACGCGGATTCACCTAAGGATT3636480.15183891930279275No Hit
CAGACGCGAAGTCGCGATCCCTGA3310500.13822783085618384No Hit
CAGACGCGACCGGACACTTCCTGA3266620.13639564924676856No Hit
CAGACGCGACGCGAACTCATGACC2926170.12218037511446596No Hit
CAGACGCGGATTGCAACTTCATCG2837200.11846548911196642No Hit
CAGACGCGGTCACAGGACCTTGTG2749770.11481490483413644No Hit
CAGACGCGTGCTAATCTATACCTG2712500.11325871958840016No Hit
CAGACGCGTTGCAAGGAGGAGGAC2629670.10980020539724544No Hit
CAGACGCGAGCCATAACGTATTTC2627560.10971210368357481No Hit
CAGACGCGGCCTTAGTGTAACCTG2623400.10953840551823373No Hit
CAGACGCGCATAGCTTGATTGTGT2604980.10876929008419932No Hit
CAGACGCGGCTGACAGAGTTGCCC2571410.10736759599513661No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)