FastQCFastQC Report
Tue 14 Jan 2025
4DNFI6AUC1QG.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI6AUC1QG.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34895897
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGCGATTAGGACTCGCTA3957691.1341419307834384No Hit
CAGACGCGCTTGCGCACACCGTTC2368190.6786442543660649No Hit
CAGACGCGGGTTGCAGATAACTTC1984670.5687402160775521No Hit
CAGACGCGGATTTAGGAACAGGAA1597410.4577644185504101No Hit
CAGACGCGGGGAGGACTTGTTGCG1423660.4079734646167715No Hit
CAGACGCGATTGGGATGTGCGGAA1302960.37338487100646817No Hit
CAGACGCGTGTAAGTACCGTAAAT1219020.3493304671319955No Hit
CAGACGCGAAACTAGCTCCTCACC979850.2807923235215877No Hit
CAGACGCGGACTCAAACCAGGTTG976940.27995841459527465No Hit
CAGACGCGCATCATGTGTCACGGC813000.23297867941322728No Hit
CAGACGCGGACTTACCTTTATCCC785100.22498347011971065No Hit
CAGACGCGACGGCTCCTATTGGCT726510.20819353060332565No Hit
CAGACGCGAGTGAATCTTTATCCC702140.20120990155375573No Hit
CAGACGCGGATGAAGGATAACCTT687970.19714925224590157No Hit
CAGACGCGAAATGGAACACCTTGC638150.18287250217410947No Hit
CAGACGCGCGGTATTTGAATCGAG629980.1805312527143234No Hit
CAGACGCGCGAACTAGAAGGCTAC626250.17946235914210773No Hit
CAGACGCGGCTATGGGAGTCCCTG622370.17835048057369035No Hit
CAGACGCGCGCCTCTCTCAAACTT607240.17401472729014533No Hit
CAGACGCGTGCTTCCTGGTCCTAG605730.17358201166171483No Hit
CAGACGCGCATCCAGCTCAAGAAC598430.17149007517989867No Hit
CAGACGCGGGACCATGAGTCCCTG590900.1693322283705732No Hit
CAGACGCGACAACTAGATACTTCA579870.16617139831654135No Hit
CAGACGCGACAGGCTGAGCTTTGT572580.1640823275011386No Hit
CAGACGCGATATCAGGATTACTTG526420.15085441133666802No Hit
CAGACGCGCAATGAGCTCTAGCCA505380.1448250492027759No Hit
CAGACGCGCGGCAAGCTTAGTGCC500030.14329191767158186No Hit
GGGGGGGGGGGGGGGGGGGGGGGG455990.130671522786762No Hit
CAGACGCGACTTGTCGATTCATGT446250.1278803637000648No Hit
CAGACGCGCTTGAATCTTGAGGAT443430.12707224577147277No Hit
CAGACGCGTCGCAACCTAAGCACG438320.12560789023420146No Hit
CAGACGCGTAATCCGTGCAGCAAG429520.12308610379036826No Hit
CAGACGCGTCAGTAAACCTGGTGA419150.1201144077196239No Hit
CAGACGCGCCTATGGCTGGCTATT413130.11838927653872888No Hit
CAGACGCGCCCTTTACTAAGCTAA411980.11805972490118251No Hit
CAGACGCGGGGTAGCTGCAAGGGT380410.10901281603393086No Hit
CAGACGCGTACGGGCGAGGCAATC380310.10898415936979639No Hit
CAGACGCGGAATCCGGACTCAATT375000.10746249050425612No Hit
CAGACGCGTGGAGCGCTTCTCACT373330.10698392421321051No Hit
CAGACGCGCAGTAAGCTGGCCAAA371840.10655693991760692No Hit
CAGACGCGCGCCTCTCTATCCTAG364260.10438476477621424No Hit
CAGACGCGCCACAAAGACCATTAT363700.10422428745706122No Hit
CAGACGCGCCGTTAGCTTGATGAG361650.10363682584230462No Hit
CAGACGCGCTAGTGCCTAAAGCCG355850.10197473932250546No Hit
CAGACGCGACTAGGATGGCTTAGC349350.100112056153765No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)