FastQCFastQC Report
Tue 14 Jan 2025
4DNFI5V7ZWZU.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI5V7ZWZU.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26023614
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGAACTTCGCTCATCATA568220.21834784361618645No Hit
CAGACGCGTGAATCTCTATTGCAC561750.21586164012423487No Hit
CAGACGCGCAGAGGGACATCCACC553780.21279903705918785No Hit
CAGACGCGTAAGGTCGAGTCCCTG518230.1991383671768264No Hit
CAGACGCGCTGTATTGAGGAAGGC457030.17562126459453326No Hit
CAGACGCGGATGGCTGAGCTAACG454370.17459911601824404No Hit
CAGACGCGCTGTATTGAAATATGC363590.13971541385450922No Hit
CAGACGCGTGTCAATCTACTCCTC341280.13114243087067No Hit
CAGACGCGCAGTAATACTTGTTGC335450.12890215786323914No Hit
CAGACGCGTAAGGTTACCCGGTTC324390.12465217167761558No Hit
CAGACGCGTACGGACACGTAGTTG321230.12343788991029454No Hit
CAGACGCGGCGGTACACGCAATTG305410.11735879574604818No Hit
CAGACGCGGCTTAAAGACAAACTG302430.11621368192749862No Hit
CAGACGCGGTTGACCTGTTGTTCT271820.1044512879725314No Hit
CAGACGCGAAATGCTGATCAGGGC260980.10028584039096183No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)