FastQCFastQC Report
Tue 14 Jan 2025
4DNFI58SPN2L.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI58SPN2L.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58739286
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGTGGACACTGATGGC1398440.2380757573389639No Hit
CAGACGCGGATGCAGCTTCAAGGA1253240.21335635574460335No Hit
GGGGGGGGGGGGGGGGGGGGGGGG643620.10957232268706842No Hit
CAGACGCGTCCCTTTGAGGCTTGA628430.10698631917316802No Hit
CAGACGCGAGCAAACTGGTTTGGC621620.10582695880913501No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)