FastQCFastQC Report
Tue 14 Jan 2025
4DNFI47KXC2Z.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI47KXC2Z.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27374538
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTCCCATAACCCAAAGC659920.24107073514811464No Hit
CAGACGCGCAACCTGCTCACATTA627740.22931528561322204No Hit
CAGACGCGACATAGTGATTCATCA559860.20451852009338017No Hit
CAGACGCGGCAACGGTGGCTTCGA485710.177431304959375No Hit
CAGACGCGAGTCTTGCTGACCGCT419130.15310943329892912No Hit
CAGACGCGGAGAGCAACCTAGTAA390150.14252295326408795No Hit
CAGACGCGGGCGAGAGAGTATGTA373630.13648814822007224No Hit
CAGACGCGAAGACAAACGCTAATG343260.12539389705864626No Hit
CAGACGCGCAGGCCTTGCTAGAAA311310.11372246720656985No Hit
CAGACGCGTCCTAAGTGTCCCGGA290910.1062702866437417No Hit
CAGACGCGAAGTGAGGATAGCCAA288730.10547392617183166No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)