FastQCFastQC Report
Tue 14 Jan 2025
4DNFI3SUME9J.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI3SUME9J.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences186122962
Sequences flagged as poor quality0
Sequence length24
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGAGGGTGGGAGCCACAA3239740.17406449828581602No Hit
CAGACGCGCCGATTATGTGGCTAT3164000.1699951454673282No Hit
CAGACGCGCTGCTGTGAGCAGGTT2712110.14571603475771033No Hit
CAGACGCGTTCGCGCACGGATTAC2615840.14054364769887984No Hit
CAGACGCGCAGAACCACTTAGGCG2424960.1302880619318749No Hit
CAGACGCGTAAACCGGATTCCTCT2418330.1299318458084715No Hit
CAGACGCGCGAATATACATTGCAG2285830.12281289613261151No Hit
CAGACGCGTCGGTTTACCTACCTA2275270.122245529275426No Hit
CAGACGCGAGTGTGCGAAGCTTAA2261580.12150999402212392No Hit
CAGACGCGACCATTATGTCCAGCG2241090.12040910889866453No Hit
CAGACGCGGCGATAGCTAACACCT2090020.11229243170974251No Hit
CAGACGCGCTGAGCAACAAAGCTC2074920.11148114008630487No Hit
CAGACGCGGCGGTTGACATTAGCG2047250.109994488482297No Hit
CAGACGCGTGCTTCCTGAGTGCGG2031560.109151497384831No Hit
CAGACGCGATGATGACTACTACGT2008900.10793402267045374No Hit
CAGACGCGGTAGGTTACGGGTTTA1974640.10609330405992573No Hit
CAGACGCGCGTTTCGGAGAACCGT1965680.10561190187807135No Hit
CAGACGCGGGTGAGGGAGCTTAGG1958680.1052358064234976No Hit
GGGGGGGGGGGGGGGGGGGGGGGG1953460.10495534667022977No Hit
CAGACGCGGCATATTTGGCTTGCA1949070.10471948109228993No Hit
CAGACGCGAATCGTGACGGGTTAT1928610.10362020780649299No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)