FastQCFastQC Report
Tue 14 Jan 2025
4DNFI3O2GXNV.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI3O2GXNV.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26733354
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGCGATTAGGACTCGCTA3968731.484561196473888No Hit
CAGACGCGCTTGCGCACACCGTTC2565510.9596663404075673No Hit
CAGACGCGGATTTAGGAACAGGAA2054330.7684520243887093No Hit
CAGACGCGGGTTGCAGATAACTTC1711990.6403947667771129No Hit
CAGACGCGGGGAGGACTTGTTGCG1566510.5859758562281411No Hit
CAGACGCGATTGGGATGTGCGGAA1336700.500012082284924No Hit
CAGACGCGGACTCAAACCAGGTTG1014070.3793276369287595No Hit
CAGACGCGGACTTACCTTTATCCC900870.3369835300127324No Hit
CAGACGCGAAACTAGCTCCTCACC898800.33620921639686513No Hit
CAGACGCGTGTAAGTACCGTAAAT881640.32979026874069No Hit
CAGACGCGACGGCTCCTATTGGCT654340.24476539681478052No Hit
CAGACGCGTGCTTCCTGGTCCTAG616880.23075293881942385No Hit
CAGACGCGCATCATGTGTCACGGC599480.22424421567155398No Hit
CAGACGCGGGACCATGAGTCCCTG560930.20982402731808364No Hit
CAGACGCGCGGTATTTGAATCGAG554910.2075721587347401No Hit
CAGACGCGAGTGAATCTTTATCCC531890.19896119282301802No Hit
CAGACGCGGATGAAGGATAACCTT525620.1966158081024925No Hit
CAGACGCGCATCCAGCTCAAGAAC485450.18158963518008253No Hit
CAGACGCGACAGGCTGAGCTTTGT474540.17750859095345836No Hit
CAGACGCGAAATGGAACACCTTGC463480.17337143704452496No Hit
CAGACGCGGCTATGGGAGTCCCTG451680.16895747536953276No Hit
CAGACGCGTAATCCGTGCAGCAAG428430.16026047461160317No Hit
CAGACGCGATATCAGGATTACTTG411550.1539462650290719No Hit
CAGACGCGGAATCCGGACTCAATT402340.1505011305352856No Hit
CAGACGCGCAATGAGCTCTAGCCA401140.15005225307681183No Hit
CAGACGCGACAACTAGATACTTCA398180.1489450220125765No Hit
CAGACGCGTACGGGCGAGGCAATC383240.14335649765457786No Hit
CAGACGCGCGGCAAGCTTAGTGCC379140.14182283300479245No Hit
CAGACGCGGGGTAGCTGCAAGGGT375210.1403527593282908No Hit
CAGACGCGCGCCTCTCTCAAACTT364650.1364026376937215No Hit
CAGACGCGCGAACTAGAAGGCTAC342180.12799740728379985No Hit
CAGACGCGCTTGAATCTTGAGGAT328260.12279042876550395No Hit
CAGACGCGTCGCAACCTAAGCACG319140.11937896008110319No Hit
CAGACGCGACTTGTCGATTCATGT314250.1175497844378225No Hit
CAGACGCGCCCTTTACTAAGCTAA304250.11380913895054096No Hit
CAGACGCGCCGTTAGCTTGATGAG303470.113517368602533No Hit
CAGACGCGGGTTAGTACACAAGCT301950.11294879048846619No Hit
CAGACGCGATATCAGGACATTACT299350.11197622266177301No Hit
CAGACGCGATTTGCGCTTCAATAC296220.11080540062425388No Hit
CAGACGCGCAGTAAGCTGGCCAAA286430.10714330869220526No Hit
CAGACGCGCCTATGGCTGGCTATT281510.10530291111246273No Hit
CAGACGCGATGTTGTTGTTGAGCT281250.10520565432979342No Hit
CAGACGCGTCAGTAAACCTGGTGA280020.10474555493485778No Hit
CAGACGCGTGGAGCGCTTCTCACT271380.10151363723384652No Hit
CAGACGCGCTAGTGCCTAAAGCCG268770.10053732876166604No Hit
CAGACGCGTGCAACAGAAATACGT268300.10036151842376381No Hit
CAGACGCGACTAGGATGGCTTAGC268110.10029044615950547No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)