FastQCFastQC Report
Fri 8 Aug 2025
4DNFI3GZ86LL.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI3GZ86LL.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19207399
Sequences flagged as poor quality0
Sequence length35-36
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGC870620.4532732412129305TruSeq Adapter, Index 6 (97% over 36bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)