FastQCFastQC Report
Tue 14 Jan 2025
4DNFI3CO6MR8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI3CO6MR8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71218679
Sequences flagged as poor quality0
Sequence length24
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGTACGTAACGCAATGT1723610.24201656422186657No Hit
CAGACGCGCTGGATCCTAAGGTCG937080.13157784069541645No Hit
CAGACGCGCACTATACTCACCCTC930930.1307143031956546No Hit
CAGACGCGTGGTCAAGATGGGCGT844700.1186065245607827No Hit
CAGACGCGAACTAAGCTATGGACG834850.1172234604351479No Hit
CAGACGCGACATAACGACACTAAG801920.11259967346487851No Hit
CAGACGCGCCTTTGGGATGACTTT790950.11105934722546594No Hit
CAGACGCGCCATTACACGCAATCA751570.10552989897495851No Hit
CAGACGCGAGCTTGAACCGCCCAT739080.10377614558113328No Hit
CAGACGCGCAGTTAGGAACAGGCT734740.10316675489024446No Hit
CAGACGCGGTCAATCCTAAGCGCA716870.10065758169987961No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)