FastQCFastQC Report
Tue 14 Jan 2025
4DNFI3AU5HD3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI3AU5HD3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54306023
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGTGGACACTGATGGC1431930.2636779349502356No Hit
CAGACGCGGATGCAGCTTCAAGGA1261030.2322081291056795No Hit
GGGGGGGGGGGGGGGGGGGGGGGG700210.12893781597669193No Hit
CAGACGCGTCCCTTTGAGGCTTGA632690.11650457261434886No Hit
CAGACGCGAGCAAACTGGTTTGGC600170.1105162865636469No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)