FastQCFastQC Report
Tue 14 Jan 2025
4DNFI2W8K5OX.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI2W8K5OX.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12384267
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCTATAGTGTAGATCTCGGTGG826700.6675405173354225No Hit
ATAGAGAGGTGTAGATCTCGGTGG464070.3747254480220751No Hit
CAGACGCGGCTTATTACAATTGGC412030.3327043901750503No Hit
ATACAAAAGTGTAGATCTCGGTGG389030.31413243916656514No Hit
CAGACGCGTGTAAGTACCACAAAT147050.11873936503468473No Hit
CAGACGCGTCAGCAAGAAACCGCA129360.10445511228076719No Hit
CAGACGCGGCGGATACTAACCTAC123960.1000947411744272No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)