FastQCFastQC Report
Tue 14 Jan 2025
4DNFI2QT6HE6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI2QT6HE6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19852349
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGAGGGTGGACATGCAA475500.23951825549712027No Hit
CAGACGCGTACGTTACTTCGCTCC416910.21000537518255394No Hit
CAGACGCGTTTGTACGAAGCTAAT307750.15501943875759994No Hit
CAGACGCGATGGATTGAACGGTGT271020.13651784985242804No Hit
CAGACGCGGCCAAATACTAAATGC252430.12715371868588446No Hit
CAGACGCGCAGTTAGGAGCAACAC221320.1114830290360098No Hit
CAGACGCGGCGATTAACCATAATG215300.10845064228923236No Hit
CAGACGCGCAACGGTACACCATGA202350.10192748475256001No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)