FastQCFastQC Report
Tue 14 Jan 2025
4DNFI2QKKSIX.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI2QKKSIX.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28540621
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTCCCATAACCCAAAGC702370.24609485546933266No Hit
CAGACGCGCAACCTGCTCACATTA659820.23118628007428432No Hit
CAGACGCGACATAGTGATTCATCA592880.2077319901343422No Hit
CAGACGCGGCAACGGTGGCTTCGA508150.17804447913028942No Hit
CAGACGCGAGTCTTGCTGACCGCT446560.1564647104209821No Hit
CAGACGCGGAGAGCAACCTAGTAA417050.14612506153948088No Hit
CAGACGCGGGCGAGAGAGTATGTA388160.1360026468940532No Hit
CAGACGCGAAGACAAACGCTAATG353590.12389008634395166No Hit
CAGACGCGCAGGCCTTGCTAGAAA330130.11567022315316824No Hit
CAGACGCGTCCTAAGTGTCCCGGA311960.10930385852501248No Hit
CAGACGCGAAGTGAGGATAGCCAA302060.10583511830383789No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)