FastQCFastQC Report
Tue 14 Jan 2025
4DNFI2CU4CDS.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI2CU4CDS.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58821965
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGTGGACACTGATGGC1231900.2094285697528126No Hit
CAGACGCGGATGCAGCTTCAAGGA1102020.1873483825302334No Hit
GGGGGGGGGGGGGGGGGGGGGGGG636310.10817557692946844No Hit
CAGACGCGAGCAAACTGGTTTGGC623750.10604032014231418No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)