FastQCFastQC Report
Tue 14 Jan 2025
4DNFI1QS3QKS.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI1QS3QKS.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71215408
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGGGAACCTGTAATGGA1924560.2702448885780448No Hit
CAGACGCGCTAACAGGATTATTGC1807400.25379339257594363No Hit
CAGACGCGCCAATATCTTCAACCG1063990.1494044659548956No Hit
CAGACGCGCGGTTAGACTCAATAG1028620.14443784412496802No Hit
CAGACGCGGGAACAAGAGCTTGCC965200.13553246791761692No Hit
CAGACGCGCTCTAGCGACGAAGGA914560.12842164718062135No Hit
CAGACGCGCGATCCGTGTTCAAGC875530.12294109162444171No Hit
CAGACGCGCGTAAATACCTTTACG865430.12152285921046749No Hit
CAGACGCGCAATGCGACCTCACAT835540.1173257337794091No Hit
CAGACGCGAAATGACCTCACAACC833900.11709544653595189No Hit
CAGACGCGCATAGTGGATTACGGA826120.11600298632003907No Hit
CAGACGCGTCTCTATTGCACCTAA725870.10192597646846312No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)