FastQCFastQC Report
Tue 14 Jan 2025
4DNFI1EXXCU8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI1EXXCU8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23835379
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTAACCGGACCGTGCTC1118530.4692730079937055No Hit
CAGACGCGTTAGGAGCTAGATTGA751410.3152498644976444No Hit
CAGACGCGGCTCGACCTGGACCTC417010.1749542140697658No Hit
CAGACGCGGGTAACCGAAGGACAA389460.1633957655970144No Hit
CAGACGCGCGGATTAGAGTTACTC376420.15792490650138183No Hit
CAGACGCGACATTAGGATTGAGTG364920.15310014579587763No Hit
CAGACGCGACAGGCTGACCATGCT345130.14479736193831866No Hit
CAGACGCGTTTGTACGAGCTTACT337630.14165077886951158No Hit
CAGACGCGTGGTCAAGATGACTTT332240.13938943450406222No Hit
CAGACGCGGTGGTGACTTGATTAC329590.13827764181975039No Hit
CAGACGCGCTTGAGCCTAAGAATC324220.13602468834248452No Hit
CAGACGCGACTTGTCGAGGCGGAA319220.1339269662966131No Hit
CAGACGCGACTCAATTGTCATCCC312130.1309523964355675No Hit
CAGACGCGGTTATTGTGTTGACCA308880.1295888771057511No Hit
CAGACGCGCAGCGATACATAACGC307250.128905019718797No Hit
CAGACGCGACAGTTAGATCCCTTT300400.1260311405159532No Hit
CAGACGCGGACACCTTGGCCATCA296520.124403308208357No Hit
CAGACGCGTCCGTTAACAAAGCTC296070.12421451322422858No Hit
CAGACGCGAGTGAGCCTAACCCTA284250.1192554983077886No Hit
CAGACGCGCGGTTAGACCTTTGAC284030.11916319853777027No Hit
CAGACGCGGCTATACCTAAATACG281410.11806399218573366No Hit
CAGACGCGCCAAATAACGCGAACC280050.11749341178925662No Hit
CAGACGCGGTCAAGCGACCAAATG271850.11405314763402756No Hit
CAGACGCGGATAGCCGAAGTAAGG271110.1137426847712386No Hit
CAGACGCGGTTAGTTTGGCCACAT269100.11289940050879829No Hit
CAGACGCGACAATTGGAACCTGGA266930.11198898914089012No Hit
CAGACGCGCAAGGCTACCGCACTC266860.11195962103224791No Hit
CAGACGCGGCGCATTTGAATCGAG264260.11086880556839478No Hit
CAGACGCGCTGGATCCTAAATGCA263420.11051638826468839No Hit
CAGACGCGGCCATAAACAAGCTCA261490.10970666755498204No Hit
CAGACGCGACTAAGACTATCCGTA260720.10938361835991783No Hit
CAGACGCGAATTAGCGACGGTTGG259490.10886757873663348No Hit
CAGACGCGCCAACAAGACACCGTT258810.10858228853839497No Hit
CAGACGCGCGGCACTTGAGCCTTG255370.10713905577083545No Hit
CAGACGCGGTGGCTAGAGGCCCTT251560.10554059157188145No Hit
CAGACGCGAAGCCTAACAGCTATG250040.10490288406993654No Hit
CAGACGCGGGAGGCTTGTTGCGGC249780.10479380252355122No Hit
CAGACGCGTTCGTAACTTGTCCAG249760.10478541163536775No Hit
CAGACGCGTGTGTTACTATCCTAG247330.10376591872107425No Hit
CAGACGCGCGCCTCTCTGGTAAAT241720.10141227458560653No Hit
CAGACGCGTCTAACCACCTGATTC241640.10137871103287262No Hit
CAGACGCGGCGCATCCTCAAGGTA240050.1007116354222855No Hit
CAGACGCGCCTTACGGATAGCCAA239440.1004557133326892No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)