FastQCFastQC Report
Tue 14 Jan 2025
4DNFI1CGHMUV.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI1CGHMUV.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59079723
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGTCCTAACTACCTCCT1048130.17740943030487805No Hit
CAGACGCGTGAGGAAACAAGGTTC1044270.17675607585363934No Hit
CAGACGCGTCAGGTAGAAGCTTGG808220.13680158926946898No Hit
CAGACGCGGAAGCTATGTTGCAGT600180.10158815402705934No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)