FastQCFastQC Report
Tue 14 Jan 2025
4DNFI1C1TTXB.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI1C1TTXB.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57594546
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGAGGGTGGACATGCAA1267560.22008333914117495No Hit
CAGACGCGTACGTTACTTCGCTCC1114130.19344366391914955No Hit
CAGACGCGTTTGTACGAAGCTAAT855080.1484654467108743No Hit
CAGACGCGGCCAAATACTAAATGC664610.11539460698240421No Hit
CAGACGCGGCGATTAACCATAATG618240.10734349742074537No Hit
CAGACGCGATGGATTGAACGGTGT613270.10648056848994No Hit
CAGACGCGCAGTTAGGAGCAACAC591250.102657289806573No Hit
CAGACGCGATAATGCGACCTTGTG577120.10020393250430346No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)