FastQCFastQC Report
Tue 14 Jan 2025
4DNFI13UAXCN.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFI13UAXCN.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74739764
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGAGGGTGGGAACAAGGA3587730.48002961315211No Hit
CAGACGCGCCAATACTGATGACAG2343330.31353189715718127No Hit
CAGACGCGCGCACCATGCACCTAA2102420.28129872071846523No Hit
CAGACGCGCAGTAATACCTTAACC1695790.22689260833095487No Hit
CAGACGCGGACCTAGGAACATAAC1229820.16454694719132376No Hit
CAGACGCGTCGACAAGAAGGACAA1219820.16320897133151238No Hit
CAGACGCGGCTATGTCTATGGCTT1189700.15917898804176048No Hit
CAGACGCGGGTTGGTGACATTACT1189010.1590866677074335No Hit
CAGACGCGGTCGATTCTTAGGTAG1147390.15351801217889852No Hit
CAGACGCGGACTTGCTGACACAAG1032920.1382022025116376No Hit
CAGACGCGGAACCGCACCCGCTCA1019250.13637318951127542No Hit
CAGACGCGCTATTGTGATTGAGTG930310.12447323221411297No Hit
CAGACGCGGTGAGGAACCCGCTCA891670.11930329349180177No Hit
CAGACGCGATGAGGAGAGCATGCA882920.11813256461446682No Hit
CAGACGCGGGCTTCGCTGCAAGTG873820.11691500658203843No Hit
CAGACGCGGACCAGGTGTGCTGGC871020.11654037334129126No Hit
CAGACGCGTATGCTCACGCTTGTC868160.1161577122453852No Hit
CAGACGCGAGCAAGCCTCGCTCAA853570.11420560546592039No Hit
CAGACGCGTGGGTTAGAGGCATGT844160.11294657018183789No Hit
CAGACGCGTGGCTTATGGCGCGAA842630.11274185987528675No Hit
CAGACGCGGCCAACCCTAGATTGA833190.11147881066362478No Hit
CAGACGCGGGATTTAGATAACCGA826530.11058771874099041No Hit
CAGACGCGAAGTGAGGAGCTTGAG820520.10978359524924378No Hit
CAGACGCGTCGATTCACTTAAAGC813290.10881623870260013No Hit
CAGACGCGTGAACGGTGACACAAG794460.1062968301585753No Hit
CAGACGCGTAGGTTTCTAAAGCGC792190.10599310963839811No Hit
CAGACGCGGGTAACTACGCCACAG778930.10421895364828822No Hit
CAGACGCGAAGAAGCGAGGATATT775270.10372925448359725No Hit
CAGACGCGGAGGGAGCTGAGTCTT774510.1036275683182516No Hit
CAGACGCGTCAGCAAGAGCAAACC758900.101538988001086No Hit
CAGACGCGGCAATAACTTGATTAC755560.101092104063909No Hit
CAGACGCGTAAGCACGACCTCAGT750600.10042846803744257No Hit
CAGACGCGCTAGATTCTATTGACC750330.10039234268922766No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)